BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013E06SP1|AL426536
(842 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1370 1651 0.0
>3x_Contig1370
Length = 5848
Score = 1651 bits (832), Expect = 0.0
Identities = 840/842 (99%), Gaps = 1/842 (0%)
Strand = Plus / Minus
Query: 1 aatctttgtcttccaccgactattctgacatgaataagccgcgcggngctaatgttataa 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 4562 aatctttgtcttccaccgactattctgacatgaataagccgcgcgg-gctaatgttataa 4504
Query: 61 taaatcgttgattgcgccctctggattttatattctcatttggaagtgcttcgaacttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4503 taaatcgttgattgcgccctctggattttatattctcatttggaagtgcttcgaacttgt 4444
Query: 121 gctgtcaatatagttaccattacgatttacgaacgaacttactaacttcattcttattca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4443 gctgtcaatatagttaccattacgatttacgaacgaacttactaacttcattcttattca 4384
Query: 181 acagacgtcaagggtattaattacgttatcaattacgatatgccaggcaacatcgaagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4383 acagacgtcaagggtattaattacgttatcaattacgatatgccaggcaacatcgaagat 4324
Query: 241 tatgtgcatagaattggtagaactggtagagccggttctactggtactgccatctccttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4323 tatgtgcatagaattggtagaactggtagagccggttctactggtactgccatctccttc 4264
Query: 301 ttcactgaaggcaataaatctctgggtgctgctttgatcaagattatgagagaagctaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4263 ttcactgaaggcaataaatctctgggtgctgctttgatcaagattatgagagaagctaaa 4204
Query: 361 caagatattccagaagaactaagaagatacgacaggggtcaatacggccaacatccaaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4203 caagatattccagaagaactaagaagatacgacaggggtcaatacggccaacatccaaga 4144
Query: 421 tatggtggcggccgtggtggtcgtggctttggtggtggccgtggtggccgtggctttggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4143 tatggtggcggccgtggtggtcgtggctttggtggtggccgtggtggccgtggctttggt 4084
Query: 481 ggccgtggtgatggtggttacggtggtggtggttacggtggtggccgtggcggcttcggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4083 ggccgtggtgatggtggttacggtggtggtggttacggtggtggccgtggcggcttcggt 4024
Query: 541 ggaaacagatccagagaccaaggctggagacgttagtttgtataacgtctttgcgatttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4023 ggaaacagatccagagaccaaggctggagacgttagtttgtataacgtctttgcgatttg 3964
Query: 601 ttctttaaaaaacattatatatttgctatctgctggttgctggttgctgattataacaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3963 ttctttaaaaaacattatatatttgctatctgctggttgctggttgctgattataacaat 3904
Query: 661 attattctatatatttwtgtacattactattgtctaattgataaacttaagaattaatag 720
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3903 attattctatatatttatgtacattactattgtctaattgataaacttaagaattaatag 3844
Query: 721 agtctgcctaccaatcatcaccccaaccgtcctctgtatcgtcatcatcgaggacaagat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3843 agtctgcctaccaatcatcaccccaaccgtcctctgtatcgtcatcatcgaggacaagat 3784
Query: 781 ttgacattttagatggaatattggttgcgcttttgatgtttttgctggaagttacaatag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3783 ttgacattttagatggaatattggttgcgcttttgatgtttttgctggaagttacaatag 3724
Query: 841 ga 842
||
Sbjct: 3723 ga 3722
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6164
Number of Sequences: 1807
Number of extensions: 6164
Number of successful extensions: 62
Number of sequences better than 1.0e-20: 1
length of query: 842
length of database: 10,358,551
effective HSP length: 16
effective length of query: 826
effective length of database: 10,329,639
effective search space: 8532281814
effective search space used: 8532281814
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)